Webgility vs Zoho Inventory (2026): which should you pick?

Pick Webgility if

• Fits if you sell online and keep your books in QuickBooks or Xero
• Works for sellers who want orders and payouts posted without retyping

Look elsewhere if

• Not for you if you want a stand-alone stock system: it works through your accounting file
• Tight if you run 3 or more channels: Pro and Advanced allow 2, Complete allows 3
• Pricey if you grow past your order limit: $10 a month per extra 500 orders
• Watch out: Enterprise and Intuit tabs show higher prices, such as $199 for 1,000 orders

Pick Zoho Inventory if

• Fits if you sell on Amazon, eBay, Etsy or Shopify and want stock kept in sync
• Works for businesses already on Zoho Books or Zoho CRM

Look elsewhere if

• Tight if you need barcodes or stock counts, which start on Premium at $79 a month
• Not for you if you make products from raw materials, as there are composite items but no production planning
• Skip it if you run several Shopify stores and want Standard's price, as it connects just one
• Tight if you stay free, as it stops at 50 orders a month, 1 user and 1 location
• Pricey if you grow past a plan, as each extra user or 500 orders is $7.50 a month and each location $10

Webgility

• It works through QuickBooks or Xero rather than being a stand-alone warehouse system; the site shows QuickBooks as the source of inventory data.
• Pricing follows monthly order volume, with 2 sales channels on Pro and Advanced and 3 on Complete.
• Intuit Enterprise Suite and QuickBooks Enterprise tabs show higher prices, such as $199 a month for 1,000 orders on one of them.
• The pricing page states the monthly and annual billing amounts but does not state a trial length.

Zoho Inventory

• Each plan caps orders a month, users and locations; more users or 500 extra orders cost $7.50 a month each billed annually ($9 monthly).
• Extra locations cost $10 a month billed annually ($12 monthly), and advanced warehousing is $124.17 a month billed annually.
• Barcodes, stock counts and serial and batch tracking start on Premium; Standard has none of them.
• The Free and Standard plans connect only one Shopify store; Premium and higher allow up to five.

Webgility

Order and payout sync

Posts orders, returns, refunds, payouts, expenses and fees from storefronts and marketplaces into QuickBooks or Xero, and can create missing products and customers.

Inventory and price sync

Treats QuickBooks as the source for quantities and prices and pushes changes to each connected sales channel after a sale or an adjustment.

Low stock alerts and purchase orders

The inventory page describes reorder-point alerts and purchase orders created in QuickBooks when stock falls below a threshold.

Demand forecasting

The inventory page describes forecasts of demand and recommended reorder quantities based on sales history.

Multi-location tracking

Tracks stock across multiple warehouses and QuickBooks inventory sites.

Reconciliation and close

The Complete plan adds COGS, bank, credit card, payout and channel settlement reconciliation with a channel-level month-end close.

Zoho Inventory

Marketplace and store sync

Syncs orders and stock with Amazon, eBay, Walmart, Etsy, Shopify and WooCommerce, with Shopify stores capped per plan.

Multiple warehouses

Stock across locations with transfer orders and bins, plus an advanced warehousing add-on for larger operations.

Sales and purchase orders

Sales orders, invoices, purchase orders, backorders and dropshipments, with customer and vendor portals.

Shipping

Pick, pack and ship from one place, generate shipping labels and connect carriers such as UPS, USPS, FedEx and Easyship.

Barcodes, serials and batches

Barcode generation, stock counts and serial and batch tracking from the Premium plan up.

Zoho apps and accounting

Works with Zoho Books, Zoho CRM and Zoho Analytics, and also connects to QuickBooks Online and Xero.

Webgility

• Pro$69

  per month for up to 300 orders, billed annually ($79 billed monthly)

  For QuickBooks Online or Xero: 2 sales channels, 3 months of history, orders, payouts, inventory, price and cost sync. Price rises with orders.

• Advanced$129

  per month for up to 800 orders, billed annually ($149 billed monthly)

  Everything in Pro plus B2B syncing of purchase order numbers, payment terms, invoice payments and company customers. Extra orders cost $10 a month per 500.

• Complete$299

  per month for up to 1,500 orders, billed annually ($349 monthly)

  Everything in Advanced plus 3 channels, COGS, bank, card and payout reconciliation, and a month-end close. Extra orders cost $10 a month per 500.

Zoho Inventory

• Free$0

  50 orders a month, 1 user and 1 location, with composite items, dropshipments and backorders.

• Standard$29

  per organization / month, billed annually ($39 billed monthly)

  500 orders a month, 3 users and 2 locations, with a customer portal and 1 Shopify store.

• Premium$79

  per organization / month, billed annually ($99 billed monthly)

  3,000 orders a month, 5 users and 4 locations, adding barcodes, stock counts, serial and batch tracking, and up to 5 Shopify stores.

• Plus$129

  per organization / month, billed annually ($159 billed monthly)

  7,500 orders a month, 10 users and 6 locations, adding an online store builder, WhatsApp selling and abandoned cart recovery.

• Enterprise$249

  per organization / month, billed annually ($299 billed monthly)

  15,000 orders a month, 10 users and 10 locations, adding Zoho Analytics and multi-currency transactions per contact.

Webgility

• Annual discount

  Annual billing saves about 15%

  The pricing page lists Pro at $69 a month billed annually against $79 billed monthly, and shows yearly savings of $120 on Pro, $240 on Advanced and $600 on Complete.

Zoho Inventory

• Annual discount

  Save up to 26% with yearly billing

  Yearly billing cuts Standard from $39 to $29 a month, Premium from $99 to $79, Plus from $159 to $129 and Enterprise from $299 to $249.

• Nonprofit

  15% off for nonprofits

  Zoho offers nonprofits a 15% discount on Zoho Inventory, arranged by writing to its presales team.